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Muscle Model Explorer

OpenWorm/Muscle-Model-Explorer

Understand the way the muscle model is built up via NeuroML2 to produce cell membrane dynamics!

 

Marc Miranda

Expert

Awarded badge on September 22, 2016

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Looks great!

Responses are right on. Great job completing this.
Small 691074974ecd2319bff1776ffc798be0 marc4mir Over 2 years ago

Badge Portfolio

Earn the pre requisite badges

Evidence visible to public
Screenshot of your badgelist profile with the Hodgkin-Huxley tutorial badge (http://bit.ly/2bJO9VW) and the Muscle Model builder badge (http://bit.ly/2bKjCTw) successfully earned. More Info

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Run the figure 2A code & compare to paper

Evidence visible to public
On the command line in the NeuroML2 directory, run: pynml LEMS_Figure2A.xml Find figure 2A in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info

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Run the figure 2B code & compare to paper

Evidence visible to public
On the command line in the NeuroML2 directory, run: pynml LEMS_Figure2B.xml Find figure 2B in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info

Full fig2bcrop