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Muscle Model Explorer

OpenWorm/Muscle-Model-Explorer

Understand the way the muscle model is built up via NeuroML2 to produce cell membrane dynamics!

 

Sergio Miguel Tomé

Learner

Joined badge on October 18, 2017

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Badge Portfolio

Earn the pre requisite badges

Evidence visible to public
Screenshot of your badgelist profile with the Hodgkin-Huxley tutorial badge (http://bit.ly/2bJO9VW) and the Muscle Model builder badge (http://bit.ly/2bKjCTw) successfully earned. More Info

Full badgelist

Run the figure 2A code & compare to paper

Evidence visible to public
On the command line in the NeuroML2 directory, run: pynml LEMS_Figure2A.xml Find figure 2A in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info

Full musclemodelfigure2a

Run the figure 2B code & compare to paper

Evidence visible to public
On the command line in the NeuroML2 directory, run: pynml LEMS_Figure2B.xml Find figure 2B in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info

Full musclemodelfigure2b